= 3d Brain Atlas Reconstructor =

''Software dedicated to automatic generation of models of 3D brain structures.''

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== Standalone software == 
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== Web service ==
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* [wiki:barSoftware3dbarTeaser Software overview]
* '''[wiki:barSoftwareInstallation Download and installation]'''
* [wiki:barSoftware3dbarExamples Sample reconstructions]
* [wiki:barSoftwareExportFormats Supported file formats]
* [wiki:barSoftwareInteroperability Interoperability with other atlasing software]
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* '''[http://service.3dbar.org Web-based service interface]'''
* [wiki:barServiceServiceSyntax Full syntax of the services]
* [wiki:barServiceAvailableDatasets List of available datasets]

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''
=== Updates ===
  * CAF dataset for [http://www.ncbi.nlm.nih.gov/pubmed/21163300 symmetrical Waxholm Space] available, [http://www.3dbar.org:8080/getPreview?cafDatasetName=whs_0.5_symm;structureName=Brain see the live preview].
  * The 3D Brain Atlas Reconstructor is [http://www.nitrc.org/projects/bar3d/ NITRC listed],
  * 3dBAR standalone v0.1 [wiki:barSoftwareInstallation released],
  * [http://service.3dbar.org/ Online repository] of models of brain structures launched, see http://service.3dbar.org,
  *  CAF dataset for [http://mouse.brain-map.org/atlas/index.html Allen Mouse Brain Atlas] now available, [http://www.3dbar.org:8080/getPreview?cafDatasetName=aba;structureName=Brain see the live preview].
  * New [http://www.3dbar.org:8080/getPreview?cafDatasetName=whs_0.51&structureName=CNS live preview] interface,
  
  * See [wiki:barServiceUpdates Full list of updates]

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<i>Please send feedback to <a href="mailto:pmajka@nencki.gov.pl">Piotr Majka</a></i>.
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3d Brain Atlas Reconstructor is created by [http://www.neuroinf.pl/Members/pmajka Piotr Majka], Jakub Kowalski in [http://www.neuroinf.pl/neuroinflab Laboratory of Neuroinformatics] at [http://www.nencki.gov.pl/en Nencki Institute of Experimental Biology] under supervision of [http://www.neuroinf.pl/Members/danek Daniel Wójcik]. Project is supported by an infrastructural grant from the Polish Ministry of Regional Development POIG.02.03.00-00-003/09.

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<a href="http://www.nitrc.org/projects/bar3d/" target="_blank">
<img src="http://www.3dbar.org/raw-attachment/wiki/WikiStart/nitrc_listed_logo.gif" border="0" title="The 3D Brain Atlas Reconstructor is NITRC listed">
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