= 3d Brain Atlas Reconstructor =

''Software dedicated to automatic generation of 3D models of brain structures.''

'''Don't know whare to go? Start here:''' '''[http://service.3dbar.org Browser-based interface]'''

{{{#!th align=center width=350px
== Standalone software == 
}}}
{{{#!th align=center align=center width=350px
== Web service ==
}}}
||
{{{#!td
* [wiki:barSoftware3dbarTeaser Software overview]
* '''[wiki:barSoftwareInstallation Download and installation]'''
* '''[wiki:barSoftwareUserGuide User Guide]'''
* [wiki:barSoftware3dbarExamples Sample reconstructions]
}}}
{{{#!td
* '''[http://service.3dbar.org Browser-based interface]'''
* [wiki:barServiceUserGuide Tutorials and howtos]
* [wiki:barServiceServiceSyntax Full syntax of the services]

}}}
''
=== Updates ===
 * May 2012: 
   - New dataset available: [http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=sba_B05_on_Conte69 Human - Brodmann 05 mapped onto the Conte69 (2012)].
   - Updated [wiki:barServiceUserGuide screencasts].
 * March 2012: Major update of the browser-based service:
   - Possibility of performing and managing custom reconstructions (registration required),
   - Slide browser ([http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=whs_0.6.1#tab2 see example]),
   - Labeled Nifti volume and atlas package available for every atlas,
   - Improved navigation,
   - [[barServiceUserGuide|Tutorials and user guide]] comming soon...
  * December 2011: CAF dataset for [http://software.incf.org/software/waxholm-space/home The Waxholm Space], delineation 0.6.1 available, [http://www.3dbar.org:8080/getPreview?cafDatasetName=whs_0.6.1;structureName=CNS see the live preview],

  
  * See the [wiki:barServiceUpdates full list of updates]

{{{
#!html
<i>Please send feedback to <a href="mailto:pmajka@nencki.gov.pl">Piotr Majka</a></i>.
}}}

3d Brain Atlas Reconstructor is created by [http://www.neuroinf.pl/Members/pmajka Piotr Majka], Jakub Kowalski in [http://www.neuroinf.pl/neuroinflab Laboratory of Neuroinformatics] at [http://www.nencki.gov.pl/en Nencki Institute of Experimental Biology] under supervision of [http://www.neuroinf.pl/Members/danek Daniel Wójcik]. Project is supported by an infrastructural grant from the Polish Ministry of Regional Development POIG.02.03.00-00-003/09.

{{{
#!html
<br/>
<a href="http://www.nitrc.org/projects/bar3d/" target="_blank">
<img src="http://www.3dbar.org/raw-attachment/wiki/WikiStart/nitrc_listed_logo.gif" border="0" title="The 3D Brain Atlas Reconstructor is NITRC listed">
</a>
<br/>
}}}