Changes between Version 7 and Version 8 of barOpossumSupplement

Timestamp:

10/01/13 15:31:06 (11 years ago)

Author:

pmajka

Comment:

--

barOpossumSupplement

@@ -6 +6 @@
 
 
-== ABSTRACT ==
+= ABSTRACT =
 
 
-=== Following supplementary materials are available: ===
+== Following supplementary materials are available: ==
 
-Volumes localized in the stereotaxtic reference system (all volumes are represented at 50um isotropic resolution):
+=== Volumes localized in the stereotaxtic reference system ===
+
+(all volumes are represented at 50um isotropic resolution)
 
 1. Reference MR brain volume ([http://doc.3dbar.org/possum/01/mri_reference_in_srs.nii.gz Download], 14MB)
 1. Segmentation of the MR brain volume ([http://doc.3dbar.org/possum/01/segmentation_in_srs.nii.gz Download], 0.8MB; [http://doc.3dbar.org/possum/01/labels_description.txt labels description])
-3. Blockface volume - affinely coregistered to reference MR ([http://doc.3dbar.org/possum/02/blockface_volume_affine_in_srs.nii.gz Download], 16.4MB)
+3. Blockface volume - affinely coregistered with the reference MR ([http://doc.3dbar.org/possum/02/blockface_volume_affine_in_srs.nii.gz Download], 16.4MB)
 4. Nissl-stain brain volume:
-   a. Affine coregistration (Download, 17.1MB)
-   b. Affine and deformable coregistration (Download, 16.8MB)
+   a. affinely coregistered ([http://doc.3dbar.org/possum/01/nissl_stain_volume_affine_in_srs.nii.gz Download], 17.1MB)
+   b. deformably coregistered with MRI ([http://doc.3dbar.org/possum/01/nissl_stain_volume_deformed_in_srs.nii.gz Download], 16.8MB)
 5. Myelin-stain brain volume:
-   a. Affine coregistration (Download, 20.7MB)
-   b. Affine and deformable coregistration (Download, 21.7MB)
-6. micro-CT skull image (Download, 20.6MB)
+   a. affinely coregistered with MRI ([http://doc.3dbar.org/possum/01/myelin_stain_volume_affine_in_srs.nii.gz Download], 20.7MB)
+   b. deformably coregistered with MRI ([http://doc.3dbar.org/possum/01/myelin_stain_volume_deformed_in_srs.nii.gz Download], 21.7MB)
+6. micro-CT skull image ([http://doc.3dbar.org/possum/01/micro_ct_in_srs.nii.gz Download], 20.6MB)
 7. [http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=pos_0.1 Segmentation] available via the [http://www.3dbar.org:8080/ 3d Brain Atlas Reconstructor Service]. 
 
 
-Other resources (not localized in stereoraxic reference frame):
+=== Other resources ===
 
-Deformable coregistration of histology-based reconstructions:
+(not localized in stereoraxic reference frame)
+
 1. Nissl-stain brain volume affinely registered to MRI ([http://doc.3dbar.org/possum/02/nissl_affine.nii.gz rgb volume], 18.3MB) 
 2. Nissl-stain brain volume nonlineary registered to MRI ([http://doc.3dbar.org/possum/02/nissl_warped.nii.gz rgb volume], 18.1MB)