= 3d Brain Atlas Reconstructor on-line service =

''Supported by an infrastructural grant[[BR]]
from the Polish Ministry of Regional Development[[BR]]
POIG.02.03.00-00-003/09''


== Available services ==


=== [wiki:barServiceGetCafInfo getCafInfo] ===

Returns the index file of selected CAF dataset. Index file contains list of structures 
available for reconstruction, their hierarchy and list of slides within given dataset.

 syntax::
{{{
getCafInfo?cafDatasetName=<name>
         [;listStructures=(True|False)]
         [;listHierarchy=(True|False)]
         [;listSlides=(True|False)]
}}}

==== Examples ====
* http://212.87.16.231:8080/getCafInfo?cafDatasetName=whs_0.51
* http://212.87.16.231:8080/getCafInfo?cafDatasetName=whs_0.51;listSlides=False;listStructures=False

=== [wiki:barServiceGetReconstruction getReconstruction] ===

Returns a model of a given structure from selected dataset as a zip file containing the
reconstruction and short description.

 syntax::
{{{
getReconstruction?cafDatasetName=<dataset name>
                 ;structureName=<structure name>
                [;qualityPreset=(low|medium|high)]
                [;outputFormat=(vrml|x3d)]
}}}

==== Examples ====
*      http://212.87.16.231:8080/getReconstruction?cafDatasetName=whs_0.51;structureName=thalamus
*      http://212.87.16.231:8080/getReconstruction?cafDatasetName=whs_0.51;structureName=thalamus;qualityPreset=high;outputFormat=x3d

=== [wiki:barServiceGetThumbnail getThumbnail] ===

Returns a thumbnail of the reconstruction of a given structure available via
getReconstruction in png format.

 syntax::
{{{
getThumbnail?cafDatasetName=<dataset name>
            ;structureName=<structure name>
}}}

==== Examples ====
* http://212.87.16.231:8080/getThumbnail?cafDatasetName=whs_0.51;structureName=thalamus

=== [wiki:barServiceGetCafSlide getCafSlide] ===

Returns a SVG image with CAF slide filtered by provided settings.

 syntax::
{{{
getCafSlide?cafDatasetName=<dataset name>
           ;slideNumber=<slide number>
          [;structureList=[<structure #1>[,<structure #2>[...]]]]
          [;showLabels=(True|False)]
          [;showMask=(True|False)]
}}}

==== Examples ====
*      http://212.87.16.231:8080/getCafSlide?cafDatasetName=whs_0.51;slideNumber=460
*      http://212.87.16.231:8080/getCafSlide?cafDatasetName=whs_0.51;slideNumber=460;showMask=True;showLabels=False
*      http://212.87.16.231:8080/getCafSlide?cafDatasetName=whs_0.51;slideNumber=460;showLabels=False