= 3d Brain Atlas Reconstructor on-line service =

''Supported by an infrastructural grant[[BR]]
from the Polish Ministry of Regional Development[[BR]]
POIG.02.03.00-00-003/09''


== Available services ==


=== [wiki:barServiceGetCafInfo getCafInfo] ===

Returns the index file of selected CAF dataset. Index file contains list of structures 
available for reconstruction, their hierarchy and list of slides within given dataset.

==== Examples ====
* http://service.3dbar.org/getCafInfo?cafDatasetName=whs_0.51
* http://service.3dbar.org/getCafInfo?cafDatasetName=whs_0.51;listSlides=False;listStructures=False


=== [wiki:barServiceGetReconstruction getReconstruction] ===

Returns a model of a given structure from selected dataset as a zip file containing the
reconstruction and short description.

==== Examples ====
* http://service.3dbar.org/getReconstruction?cafDatasetName=whs_0.51;structureName=thalamus
* http://service.3dbar.org/getReconstruction?cafDatasetName=whs_0.51;structureName=thalamus;qualityPreset=high;outputFormat=x3d


=== [wiki:barServiceGetPreview getPreview] ===

Displays window allowing to manipulate (rotate, zoom, etc.) lightweight version of the reconstuciton.
Note that the web browser has to support [[http://en.wikipedia.org/wiki/WebGL|WebGL]] in order
to use this feature.

==== Examples ====
* http://service.3dbar.org/getPreview?cafDatasetName=whs_0.51&structureName=CNS
* http://service.3dbar.org/getPreview?cafDatasetName=whs_0.5&structureName=Hc
* http://service.3dbar.org/getPreview?cafDatasetName=sba_DB08&structureName=FBr


=== [wiki:barServiceGetThumbnail getThumbnail] ===

Returns a thumbnail of the reconstruction of a given structure available via
getReconstruction in png format.

==== Examples ====
* http://service.3dbar.org/getThumbnail?cafDatasetName=whs_0.51;structureName=corpus-callosum
* http://service.3dbar.org/getThumbnail?cafDatasetName=whs_0.51;structureName=thalamus
* http://service.3dbar.org/getThumbnail?cafDatasetName=whs_0.51;structureName=CNS
* http://service.3dbar.org/getThumbnail?cafDatasetName=sba_DB08;structureName=FL
* http://service.3dbar.org/getThumbnail?cafDatasetName=sba_DB08;structureName=LV
* http://service.3dbar.org/getThumbnail?cafDatasetName=sba_PHT00;structureName=Brain



=== [wiki:barServiceGetCafSlide getCafSlide] ===

Returns a SVG image with CAF slide filtered by provided settings.

==== Examples ====
* http://service.3dbar.org/getCafSlide?cafDatasetName=whs_0.51;slideNumber=460
* http://service.3dbar.org/getCafSlide?cafDatasetName=whs_0.51;slideNumber=460;showMask=True;showLabels=False
* http://service.3dbar.org/getCafSlide?cafDatasetName=whs_0.51;slideNumber=460;showLabels=False
* http://service.3dbar.org/getCafSlide?cafDatasetName=sba_DB08;slideNumber=84;structureList=Cx
* http://www.3dbar.org:8080/getCafSlide?cafDatasetName=sba_DB08;slideNumber=84;structureList=Cx,Th

== Available datasets ==
 whs_0.51:: http://service.3dbar.org/getCafInfo?cafDatasetName=whs_0.51
 whs_0.5:: http://service.3dbar.org/getCafInfo?cafDatasetName=whs_0.5
 sba_DB08:: http://service.3dbar.org/getCafInfo?cafDatasetName=sba_DB08
 sba_PHT00:: http://service.3dbar.org/getCafInfo?cafDatasetName=sba_PHT00
 sba_WHS09:: http://service.3dbar.org/getCafInfo?cafDatasetName=sba_WHS09
 sba_WHS10:: http://service.3dbar.org/getCafInfo?cafDatasetName=sba_WHS10