Currently 3D Brain Atlas Reconstructor software allows to export reconstructions in the following formats:
- VTK (Visualisation Toolkit) structured grid,
- NumPy array,
- NIfTI (Neuroimaging Informatics Technology Initiative),
- VRML (Virtual Reality Modeling Language),
- X3D (Extensible 3D),
- VTK (Visualisation Toolkit) polydata.