Changes between Version 24 and Version 25 of barSoftwareGUI
- Timestamp:
- 12/19/11 16:58:44 (13 years ago)
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barSoftwareGUI
v24 v25 4 4 To facilitate reconstruction process a simple graphical user interface was prepared. 5 5 Below, the 3dBAR reconstruction GUI with an exemplary CAF dataset loaded ([http://www.ncbi.nlm.nih.gov/pubmed/20600960 Johnson et. al., 2010].) 6 7 [[Image(wiki:barSoftwareGUI:3dbar_interface_strucure_selection.png)]]8 9 **Figure 1:** The ''structure selection tab''. The ''Striatum'' selected for reconstruction (gray highlight); ''Amygdala'' and ''Hippocampus'' loaded as context models (red font). The reconstruction of `Hypothalamus` is cached and available for loading (bold font).10 6 11 7 == Selecting structures == … … 23 19 needed. 24 20 21 [[Image(wiki:barSoftwareGUI:3dbar_interface_strucure_selection.png)]] 25 22 26 [[Image(wiki:barSoftwareGUI:interface_reconstruction.png)]] 27 28 **Figure 2:** The ''model customization tab''. Reconstructions of ''Striatum'', ''Amygdala'' and ''Hippocampus'' are presented. 29 23 **Figure 1:** The ''structure selection tab''. The ''Striatum'' selected for reconstruction (gray highlight); ''Amygdala'' and ''Hippocampus'' loaded as context models (red font). The reconstruction of `Hypothalamus` is cached and available for loading (bold font). 30 24 31 25 == Viewing and customizing the reconstructions == 32 26 33 27 Reconstructed models can be viewed in the ''Model customization tab'' 34 (Fig. 2) which also 35 provides access to parameters of VTK pipeline. The 28 (Fig. 2) which also provides access to parameters of VTK pipeline. The 36 29 preview is displayed in the form of triangular mesh although the 37 30 actual model is still stored in volumetric form. … … 42 35 pressing `w` or `s` keys. 43 36 37 [[Image(wiki:barSoftwareGUI:interface_reconstruction.png)]] 38 39 **Figure 2:** The ''model customization tab''. Reconstructions of ''Striatum'', ''Amygdala'' and ''Hippocampus'' are presented. 44 40 45 41 After changing VTK pipeline parameters, mesh may be recalculated by