Changes between Version 10 and Version 11 of barOpossumSupplement

Timestamp:

03/05/14 16:39:19 (11 years ago)

Author:

pmajka

Comment:

--

barOpossumSupplement

@@ -15 +15 @@
 (all volumes are represented at 50um isotropic resolution)
 
-1. Reference MR brain volume ([http://doc.3dbar.org/possum/01/mri_reference_in_srs.nii.gz Download], 14MB)
-1. Segmentation of the MR brain volume ([http://doc.3dbar.org/possum/01/segmentation_in_srs.nii.gz Download], 0.8MB; [http://doc.3dbar.org/possum/01/labels.txt labels description])
-3. Blockface volume - affinely coregistered with the reference MR ([http://doc.3dbar.org/possum/01/blockface_volume_affine_in_srs.nii.gz Download], 16.4MB)
+1. Reference MR brain volume ([http://doc.3dbar.org/possum/01/mri_reference_in_srs.nii.gz Download], 14MB),
+1. Segmentation of the MR brain volume ([http://doc.3dbar.org/possum/01/segmentation_in_srs.nii.gz Download], 0.8MB; [http://doc.3dbar.org/possum/01/labels.txt labels description]),
+3. Blockface volume - affinely coregistered with the reference MR ([http://doc.3dbar.org/possum/01/blockface_volume_affine_in_srs.nii.gz Download], 16.4MB),
 4. Nissl-stain brain volume:
-   a. affinely coregistered ([http://doc.3dbar.org/possum/01/nissl_stain_volume_affine_in_srs.nii.gz Download], 17.1MB)
+   a. affinely coregistered ([http://doc.3dbar.org/possum/01/nissl_stain_volume_affine_in_srs.nii.gz Download], 17.1MB),
    b. deformably coregistered with MRI ([http://doc.3dbar.org/possum/01/nissl_stain_volume_deformed_in_srs.nii.gz Download], 16.8MB)
 5. Myelin-stain brain volume:
-   a. affinely coregistered with MRI ([http://doc.3dbar.org/possum/01/myelin_stain_volume_affine_in_srs.nii.gz Download], 20.7MB)
-   b. deformably coregistered with MRI ([http://doc.3dbar.org/possum/01/myelin_stain_volume_deformed_in_srs.nii.gz Download], 21.7MB)
-6. micro-CT skull image ([http://doc.3dbar.org/possum/01/micro_ct_in_srs.nii.gz Download], 20.6MB)
+   a. affinely coregistered with MRI ([http://doc.3dbar.org/possum/01/myelin_stain_volume_affine_in_srs.nii.gz Download], 20.7MB),
+   b. deformably coregistered with MRI ([http://doc.3dbar.org/possum/01/myelin_stain_volume_deformed_in_srs.nii.gz Download], 21.7MB),
+6. micro-CT skull image ([http://doc.3dbar.org/possum/01/micro_ct_in_srs.nii.gz Download], 20.6MB),
 7. [http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=pos_0.1 Segmentation] available via the [http://www.3dbar.org:8080/ 3d Brain Atlas Reconstructor Service]. 
 
@@ -32 +32 @@
 (not localized in stereoraxic reference frame)
 
-1. Nissl-stain brain volume affinely registered to MRI ([http://doc.3dbar.org/possum/02/nissl_affine.nii.gz rgb volume], 18.3MB) 
-2. Nissl-stain brain volume nonlineary registered to MRI ([http://doc.3dbar.org/possum/02/nissl_warped.nii.gz rgb volume], 18.1MB) 
+1. Nissl-stain brain volume affinely registered to MRI ([http://doc.3dbar.org/possum/02/nissl_stain_affine.nii.gz rgb volume], 18.3MB) 
+2. Nissl-stain brain volume nonlineary registered to MRI ([http://doc.3dbar.org/possum/02/nissl_stain_deformed.nii.gz rgb volume], 18.1MB) 
 3. Nissl to MRI deformation field ([http://doc.3dbar.org/possum/02/nissl_to_mri_warp.nii.gz Download], 202MB)
 4. MRI to Nissl deformation field ([http://doc.3dbar.org/possum/02/mri_to_nissl_warp.nii.gz Download], 190MB)
 
-5. Myelin-stain brain volume affinely coregistered to MRI ([http://doc.3dbar.org/possum/02/myelin_warped.nii.gz rgb volume], 22.2MB) 
-6. Myelin-stain brain volume nonlineary coregistered to MRI ([http://doc.3dbar.org/possum/02/myelin_warped.nii.gz rgb volume], 23.2MB) 
+5. Myelin-stain brain volume affinely coregistered to MRI ([http://doc.3dbar.org/possum/02/myelin_stain_affine.nii.gz rgb volume], 22.2MB) 
+6. Myelin-stain brain volume nonlineary coregistered to MRI ([http://doc.3dbar.org/possum/02/nissl_stain_deformed.nii.gz rgb volume], 23.2MB) 
 7. Myelin to MRI deformation field ([http://doc.3dbar.org/possum/02/myelin_to_mri_warp.nii.gz Download], 264MB)
 8. MRI to myelin deformation field ([http://doc.3dbar.org/possum/02/mri_to_myelin_warp.nii.gz Download], 248MB)