Changes between Version 2 and Version 3 of barOpossumSupplement

Timestamp:

10/01/13 12:06:00 (11 years ago)

Author:

pmajka

Comment:

--

barOpossumSupplement

@@ -11 +11 @@
 === Following supplementary materials are available: ===
 
-{{{#!comment
-Materiały udostępnione wraz z artykułem: 
-Deformable brain volume reconstruction based on slices stained with Nissl method (volume), (mask) 
-Deformable brain volume reconstruction based on slices stained for myelinated fibres (volume) (mask) 
-
-Affinely coregistered individual modalities in stereotaxic coordinates: 
-1. Blockface volume in stereotaxic coordinate system (rgb volume) (mask) 
-2. Nissl brain volume in stereotaxic coordinate system (rgb volume) 
-3. Myelin stain-based volume in stereotaxic coordinates (rgb volume)
-4. MRI volume in stereotaxic coordinates (volume) (labels) 
-5. Computed microtomography image of the whole skull (volume) 
-
-Deformable coregistration of histology-based reconstructions: 
-1. Nissl brain volume nonlineary registered to MRI (rgb volume) 
-2. Forward deformation field (Nissl -> MRI) 
-3. Inverse deformation field (MRI -> Nissl) 
-
-4. Myelin brain volume nonlineary coregistered to MRI (rgb volume) 
-5. Forward deformation field (Myelin -> MRI) 
-6. Inverse deformation field (MRI -> Myelin) 
-
-Other resources: 
-7. Itk-snap label description file (english) (polish) 
-8. Segmentations of the brain available via the 3d Brain Atlas Reconstructor Service.
-
-
+#!comment {{{#!comment
 Resources localized in the stereotaxtic reference system (all volumes are represented at 50um isotropic resolution):
 
@@ -61 +36 @@
 
 Deformable coregistration of histology-based reconstructions: 
-1. Nissl brain volume nonlineary registered to MRI (rgb volume) 
-2. Forward deformation field (Nissl -> MRI) 
-3. Inverse deformation field (MRI -> Nissl) 
+1. Nissl brain volume nonlineary registered to MRI (RGB volume, ) 
+2. Nissl to MRI deformation field 
+3. MRI to Nissl deformation field 
 
-4. Myelin brain volume nonlineary coregistered to MRI (rgb volume) 
-5. Forward deformation field (Myelin -> MRI) 
-6. Inverse deformation field (MRI -> Myelin) 
+4. Myelin brain volume nonlineary coregistered to MRI ([http://doc.3dbar.org/possum/myelin_warped.nii.gz rgb volume], 18.1MB) 
+5. Myelin to MRI deformation field ([http://doc.3dbar.org/possum/myelin_to_mri_warp.nii.gz Download], 264MB)
+6. MRI to myelin deformation field ([http://doc.3dbar.org/possum/mri_to_myelin_warp.nii.gz Download], 248MB)
 
 Other resources: 
-7. Itk-snap label description file (english) (polish) 
-8. Segmentations of the brain available via the 3d Brain Atlas Reconstructor Service. 
-}}}
+7. [http://doc.3dbar.org/possum/label_description_polish.txt Itk-snap label description file in polish],
+8. [http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=pos_0.1 Segmentation] available via the [http://www.3dbar.org:8080/ 3d Brain Atlas Reconstructor Service]. 
+#!comment }}}